STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OBV_36680OmpR family two-component response regulator. (230 aa)    
Predicted Functional Partners:
OBV_36690
Putative two-component histidine kinase.
 0.995
OBV_40190
Putative two-component histidine kinase.
 0.983
OBV_34890
Hypothetical protein.
 
 
 0.905
OBV_40180
OmpR family two-component response regulator.
  
  
 
0.905
OBV_41240
Hypothetical protein.
 
 
 0.868
OBV_00780
Putative two-component histidine kinase.
 
 
 0.788
OBV_36500
Putative two-component histidine kinase.
 
 0.773
OBV_02420
Hypothetical protein.
 
   0.771
OBV_13140
Putative two-component histidine kinase.
 
 
 0.767
OBV_00440
Putative two-component histidine kinase.
 
 
 0.763
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.