STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_36870Branched-chain amino acid ABC transporter ATP-binding protein. (310 aa)    
Predicted Functional Partners:
OBV_11180
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
OBV_36880
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
OBV_36890
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
OBV_36860
Branched-chain amino acid ABC transporter ATP-binding protein.
 
 
0.996
OBV_36900
Branched-chain amino acid ABC transporter branched-chain amino acid-binding protein.
 
 
 0.996
OBV_11170
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
OBV_11160
Putative branched-chain amino acid ABC transporter branched-chain amino acid-binding protein.
 
 
 0.993
OBV_11200
Branched-chain amino acid ABC transporter ATP-binding protein.
 
 
0.981
OBV_11190
Branched-chain amino acid ABC transporter ATP-binding protein.
  
  
 
0.910
OBV_34360
ABC transporter ATP-binding protein.
  
  0.543
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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