STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtBAmmonium transporter. (400 aa)    
Predicted Functional Partners:
OBV_07560
Putative ammonium transporter; Belongs to the P(II) protein family.
 
 
0.951
gltB
Glutamate synthase large subunit; Protein synonym:GLTS alpha chain; protein synonym:NADPH-GOGAT; protein synonym:glutamate synthase [NADPH] alpha subunit.
 
  
 0.857
OBV_07310
Hypothetical protein.
      0.854
OBV_01150
Hypothetical protein.
      0.732
OBV_41250
Hypothetical protein.
    
 0.720
OBV_38850
Putative two-component histidine kinase.
 
    
0.612
OBV_10590
Hypothetical protein.
    
 0.599
acn
Putative aconitate hydratase; Protein synonym:aconitase.
  
 
 0.561
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
      
 0.538
OBV_38860
NarL family two component response regulator.
       0.524
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.