STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_40490CriR family two-component response regulator. (232 aa)    
Predicted Functional Partners:
OBV_40480
Two-component histidine kinase.
 
 0.972
OBV_43490
Putative two-component response regulator.
  
  
 
0.911
OBV_33040
Two-component histidine kinase.
 
 0.883
OBV_33020
Protein synonym:sodium/citrate symporter.
 
    0.702
OBV_40500
Putative sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
       0.497
OBV_04330
Hypothetical protein.
  
 
 0.462
OBV_26400
Hypothetical protein.
  
 
 0.462
OBV_30090
Hypothetical protein.
  
 
 0.462
OBV_40470
Hypothetical protein.
       0.416
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.