STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crt-33-hydroxybutyryl-CoA dehydratase; Protein synonym:crotonase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)    
Predicted Functional Partners:
hbd
Protein synonym:beta-hydroxybutyryl-CoA dehydrogenase.
 0.999
OBV_06000
3-hydroxyacyl-CoA dehydrogenase.
 0.997
OBV_24160
3-hydroxyacyl-CoA dehydrogenase.
 0.997
acdA
acyl-CoA dehydrogenase.
  
 0.962
acdA-2
acyl-CoA dehydrogenase.
  
 0.962
OBV_40710
Protein synonym:acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.960
OBV_10900
Na(+)-transporting decarboxylase.
  
 0.936
OBV_10920
Na(+)-transporting decarboxylase biotin carrier protein.
  
 0.929
OBV_16090
acyl-CoA dehydrogenase/protein FixB.
 
 0.916
OBV_24170
Putative acetyl-CoA acetyltransferase; Protein synonym:acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.912
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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