STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_43500Putative two-component histidine kinase. (471 aa)    
Predicted Functional Partners:
OBV_43490
Putative two-component response regulator.
 
     0.958
spo0A
Stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
  
 0.921
acoL
Acetoin dehydrogenase E3 component; Protein synonym:dihydrolipoyl dehydrogenase.
    
 0.851
OBV_34890
Hypothetical protein.
 
 
 
 0.850
capC
Putative capsule biosynthesis protein CapC.
 
     0.846
capB
Capsule biosynthesis protein CapB.
 
     0.846
OBV_10590
Hypothetical protein.
  
 
 0.838
OBV_43510
Hypothetical protein.
       0.814
OBV_18370
OmpR family two-component response regulator.
 
   0.796
OBV_36490
Putative two-component response regulator; Fragment.
 
   0.794
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.