Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OBV_44490Major facilitator superfamily transporter. (395 aa)    
Predicted Functional Partners:
OBV_44500
Putative UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.768
OBV_21090
Putative drug efflux protein.
  
 0.544
OBV_36760
Hypothetical protein.
  
 0.515
OBV_44510
Putative Xre family DNA-binding protein.
       0.498
OBV_33240
Major facilitator superfamily transporter.
  
     0.488
fabD
Protein synonym:[acyl-carrier-protein] S-malonyltransferase.
 
 
    0.453
OBV_36740
Putative efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    
 0.437
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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