STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALL13744.1Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)    
Predicted Functional Partners:
ALL15265.1
Outer membrane chaperone Skp; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
ALL13743.1
isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.690
ALL13942.1
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.643
ALL12199.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
ALL12767.1
Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.589
ALL12919.1
Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.585
ALL13745.1
Magnesium transporter; Acts as a magnesium transporter.
       0.585
ALL13268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.572
ALL13574.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.572
ALL14032.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.551
Your Current Organism:
Caulobacter henricii
NCBI taxonomy Id: 69395
Other names: ATCC 15253, C. henricii, CCUG 49339, CIP 106446, DSM 4730, LMG 18392, LMG:18392
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.