STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALL13971.1Peptidase C13; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)    
Predicted Functional Partners:
ALL13970.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.804
ALL13969.1
Stringent starvation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
ALL12326.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.638
ALL13972.1
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.589
ALL15255.1
Autotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.545
ALL14207.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.539
ALL13207.1
Polar localization protein TipN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.528
ALL13886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
ALL12929.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.491
ALL11958.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
Your Current Organism:
Caulobacter henricii
NCBI taxonomy Id: 69395
Other names: ATCC 15253, C. henricii, CCUG 49339, CIP 106446, DSM 4730, LMG 18392, LMG:18392
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.