STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALL14394.1Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)    
Predicted Functional Partners:
ALL14393.1
Secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.984
ALL14392.1
Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.976
ALL14395.1
Pilus assembly protein CpaE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
ALL14397.1
Flp pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
ALL15352.1
Pilus assembly protein CpaC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.
  
 0.972
ALL13089.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.
  
 0.892
ALL14396.1
Pilus assembly protein CpaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.849
ALL11999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.738
ALL14399.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.712
ALL14398.1
Pilus assembly protein CpaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.698
Your Current Organism:
Caulobacter henricii
NCBI taxonomy Id: 69395
Other names: ATCC 15253, C. henricii, CCUG 49339, CIP 106446, DSM 4730, LMG 18392, LMG:18392
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.