STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42037.1Domain of unknown function DUF1735; InterPro IPR013728; KEGG: bth:BT_1045 hypothetical protein; PFAM: domain of unknown function DUF1735; SPTR: Concanavalin A-like lectin/glucanase; PFAM: Domain of unknown function (DUF1735). (395 aa)    
Predicted Functional Partners:
ADV42039.1
KEGG: bth:BT_1043 hypothetical protein; SPTR: SusD homolog.
  
   0.834
ADV42038.1
Hypothetical protein; InterPro IPR001579; KEGG: bth:BT_1044 hypothetical protein; SPTR: Putative secreted endoglycosidase, GH family 18; PFAM: Glycosyl hydrolases family 18.
       0.816
ADV42040.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR011662: IPR012910: IPR000531; KEGG: bth:BT_1042 hypothetical protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; SPTR: SusC homolog; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain.
  
    0.757
ADV42036.1
Lytic transglycosylase catalytic; InterPro IPR000189: IPR008258; KEGG: bvu:BVU_0605 glycoside hydrolase family protein; PFAM: Lytic transglycosylase catalytic; SPTR: Glycoside hydrolase family 23; PFAM: Transglycosylase SLT domain.
       0.418
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.