STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42040.1COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR011662: IPR012910: IPR000531; KEGG: bth:BT_1042 hypothetical protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; SPTR: SusC homolog; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain. (1100 aa)    
Predicted Functional Partners:
ADV42039.1
KEGG: bth:BT_1043 hypothetical protein; SPTR: SusD homolog.
 
    0.958
ADV43845.1
KEGG: bfr:BF3612 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.787
ADV42474.1
KEGG: fjo:Fjoh_4558 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.786
ADV43724.1
KEGG: bth:BT_4405 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.782
ADV42037.1
Domain of unknown function DUF1735; InterPro IPR013728; KEGG: bth:BT_1045 hypothetical protein; PFAM: domain of unknown function DUF1735; SPTR: Concanavalin A-like lectin/glucanase; PFAM: Domain of unknown function (DUF1735).
  
    0.757
ADV42376.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bfs:BF2941 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
     0.728
ADV45172.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: pru:PRU_2228 hypothetical protein; PFAM: TonB-dependent receptor plug; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.728
ADV42303.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bfs:BF2941 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
     0.724
ADV42482.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pdi:BDI_2077 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: SusD family.
  
    0.688
ADV42558.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: coc:Coch_1140 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: Putative lipoprotein; PFAM: SusD family.
  
     0.687
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.