STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42056.1Glycoside hydrolase family 2 TIM barrel; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterProIPR006101: IPR006104: IPR006102: IPR006103: IPR 004199; KEGG: pdi:BDI_0983 beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; SPTR: Putative uncharacterized protein; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase smal [...] (1048 aa)    
Predicted Functional Partners:
ADV44643.1
COGs: COG3345 Alpha-galactosidase; InterPro IPR002252: IPR000111; KEGG: pdi:BDI_0447 alpha-glycosidase; PFAM: glycoside hydrolase clan GH-D; PRIAM: Alpha-galactosidase; SPTR: Putative uncharacterized protein; PFAM: Melibiase.
 
 
 0.947
ADV42636.1
Glucan endo-1,6-beta-glucosidase; COGs: COG5520 O-Glycosyl hydrolase; InterPro IPR001139; KEGG: pdi:BDI_1787 beta-glycosidase; PFAM: glycoside hydrolase family 30; PRIAM: Glucan endo-1,6-beta-glucosidase; SPTR: Putative uncharacterized protein; PFAM: O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
  
 
 0.907
xylA
COGs: COG2115 Xylose isomerase; InterPro IPR012307: IPR001998: IPR013452; KEGG: bvu:BVU_3953 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; Belongs to the xylose isomerase family.
    
 0.810
ADV44738.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterProIPR006104: IPR006102: IPR006103: IPR017972: IPR 006101; KEGG: bfr:BF1738 beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; SPTR: Putative uncharacterized protein; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
 
 
0.755
ADV42267.1
COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR006104: IPR006102: IPR006103; KEGG: pru:PRU_2769 family 2 glycosyl hydrolase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-galactosidase; SPTR: Putative uncharacterized protein; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 
0.753
ADV42626.1
COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR006104: IPR006103; KEGG: bvu:BVU_1785 beta-glycosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-galactosidase; SPTR: Glycoside hydrolase family 2 protein; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Di-glucose binding within endoplasmic reticulum; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 
0.752
ADV42433.1
COGs: COG1874 Beta-galactosidase; InterPro IPR019801: IPR001944; KEGG: bfs:BF3793 putative exported beta-galactosidase; PFAM: glycoside hydrolase family 35; PRIAM: Beta-galactosidase; SPTR: Beta-galactosidase; PFAM: Glycosyl hydrolases family 35.
 
 0.751
ADV42123.1
COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR020904: IPR006104: IPR006103; KEGG: bvu:BVU_3844 beta-glycosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-galactosidase; SPTR: Glycoside hydrolase family 2; manually curated; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 
0.750
ADV42628.1
Glycoside hydrolase family 2 TIM barrel; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR006104: IPR006103; KEGG: phe:Phep_2700 beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; SPTR: Putative uncharacterized protein; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 
0.740
ADV42807.1
Glycoside hydrolase family 2 TIM barrel; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterProIPR006101: IPR006104: IPR006102: IPR006103: IPR 004199: IPR000421: IPR000276; KEGG: bfs:BF3205 putative exported beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; SPTR: Putative uncharacterized protein; PFAM: [...]
  
  
 
0.719
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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