STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42130.1Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: bvu:BVU_1159 sulfatase; PFAM: sulfatase; SPTR: Aryl-sulphate sulphohydrolase; PFAM: Sulfatase. (461 aa)    
Predicted Functional Partners:
ADV42129.1
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB4784 arylsulfatase A precursor; PFAM: sulfatase; SPTR: Arylsulfatase A; PFAM: Sulfatase.
 
   
0.822
ADV42131.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bth:BT_0755 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
       0.773
ADV42132.1
TonB-dependent receptor plug; InterPro IPR011662: IPR012910: IPR000531; KEGG: bth:BT_4357 hypothetical protein; PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; TonB-dependent receptor; SPTR: SusC homolog; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain.
  
    0.742
ADV44869.1
COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); InterPro IPR007197; KEGG: bfr:BF3170 anaerobic sulfatase-maturase; PFAM: Radical SAM domain protein; SPTR: Putative uncharacterized protein; PFAM: Radical SAM superfamily.
 
 
 0.597
ADV42133.1
anti-FecI sigma factor, FecR; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860: IPR012373; KEGG: pdi:BDI_2335 putative anti-sigma factor; PFAM: FecR protein; SPTR: Putative uncharacterized protein; PFAM: FecR protein.
       0.504
ADV42128.1
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR018060: IPR005467: IPR001789: IPR004358: IPR 003661: IPR003594: IPR018062: IPR011110: IPR001180: IPR011123:I PR000005; KEGG: bth:BT_3334 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system'); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator three Y domain-containing protein; Citron-like; Two component regulator propeller; response regulator receiver; helix-turn-helix- domain containing protein AraC type; SM [...]
       0.483
ADV43335.1
COGs: COG3775 Phosphotransferase system galactitol-specific IIC component; InterPro IPR013014: IPR004703; KEGG: bvu:BVU_1796 putative phosphotransferase enzyme II, C component; PFAM: PTS system Galactitol-specific IIC component; SPTR: Putative uncharacterized protein; PFAM: PTS system sugar-specific permease component.
   
    0.431
ADV42123.1
COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR020904: IPR006104: IPR006103; KEGG: bvu:BVU_3844 beta-glycosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-galactosidase; SPTR: Glycoside hydrolase family 2; manually curated; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
 
 
 0.421
ADV42134.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284: IPR014327; KEGG: pdi:BDI_2336 RNA polymerase ECF-type sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion f [...]
       0.420
ADV43483.1
Protein of unknown function DUF323; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: bvu:BVU_1801 glycoside hydrolase family protein; PFAM: protein of unknown function DUF323; SPTR: BNR/Asp-box repeat protein; PFAM: BNR/Asp-box repeat; Formylglycine-generating sulfatase enzyme.
 
   0.402
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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