STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42160.1COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR008756: IPR006260; KEGG: bth:BT_3898 TonB; PFAM: peptidase M56 BlaR1; TonB domain; SPTR: Putative uncharacterized protein; TIGRFAM: TonB family protein; PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TC 2.C.1.1.1. (541 aa)    
Predicted Functional Partners:
ADV42159.1
COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: bfs:BF3766 hypothetical protein; PFAM: Penicillinase repressor; SPTR: Putative uncharacterized protein; PFAM: Penicillinase repressor.
 
  
 0.967
ADV43380.1
Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: bfs:BF0820 putative regulatory protein; PFAM: Penicillinase repressor; SPTR: Putative uncharacterized protein; PFAM: Penicillinase repressor.
 
  
 0.784
ADV44939.1
Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fjo:Fjoh_1362 CopY family transcriptional regulator; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family; PFAM: Penicillinase repressor.
 
  
 0.682
ADV43751.1
KEGG: bth:BT_4645 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.640
ADV43748.1
KEGG: bth:BT_4642 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.594
ADV44148.1
Protein of unknown function DUF214; InterPro IPR003838; KEGG: bth:BT_0693 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
  
     0.591
ADV43219.1
InterPro IPR019734: IPR013026: IPR001440; KEGG: pdi:BDI_2763 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR-repeat-containing protein; PFAM: Tetratricopeptide repeat.
  
     0.584
ADV42399.1
KEGG: bfr:BF0450 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: VanZ like family.
 
     0.574
ADV42998.1
InterPro IPR017936: IPR000866: IPR010916; KEGG: bfs:BF4128 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: AhpC/TSA family.
  
     0.570
ADV43425.1
InterPro IPR018550; KEGG: bth:BT_3434 hypothetical protein; PFAM: Lipid A 3-O-deacylase-related; SPTR: Putative uncharacterized protein; PFAM: Lipid A 3-O-deacylase (PagL).
  
     0.564
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.