STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42259.1InterPro IPR011659; KEGG: pdi:BDI_0062 hypothetical protein; PFAM: WD40-like beta Propeller containing protein; SPTR: Putative uncharacterized protein; PFAM: WD40-like Beta Propeller Repeat. (486 aa)    
Predicted Functional Partners:
ADV42260.1
KEGG: pdi:BDI_0063 putative transmembrane protein; SPTR: Putative uncharacterized protein.
       0.787
ADV42753.1
KEGG: bfs:BF0061 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
 
   0.781
ADV43358.1
COGs: COG3307 Lipid A core - O-antigen ligase; InterPro IPR007016; KEGG: bfs:BF2988 hypothetical protein; PFAM: O-antigen polymerase; SPTR: Putative uncharacterized protein; PFAM: O-Antigen ligase.
 
     0.762
ADV43353.1
Protein of unknown function DUF1573; InterPro IPR011467; KEGG: bfr:BF3160 hypothetical protein; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573).
  
     0.755
ADV43352.1
Hypothetical protein; InterPro IPR018247; KEGG: pdi:BDI_3423 hypothetical protein; SPTR: Putative exported protein.
 
 
   0.736
ADV42373.1
KEGG: bfr:BF0465 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.712
ADV43362.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: bfs:BF2984 putative ABC transport system, membrane protein; PFAM: acriflavin resistance protein; SPTR: Putative uncharacterized protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.700
ADV43361.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bfr:BF3150 putative outer membrane protein TolC; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
  
   
 0.693
ADV43376.1
Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: bth:BT_2475 putative translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: Putative uncharacterized protein; PFAM: Endoribonuclease L-PSP.
 
     0.661
ADV43359.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: bfr:BF3152 putative cation efflux system protein; PFAM: secretion protein HlyD family protein; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   
 0.645
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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