STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42571.1COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: dfe:Dfer_1547 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Lipooligosaccharide biosynthesis glycosyltransferase; PFAM: Glycosyl transferase family 2. (265 aa)    
Predicted Functional Partners:
ADV42570.1
Hypothetical protein; KEGG: aap:NT05HA_2255 capsular polysaccharide synthesis protein; SPTR: Capsular polysaccharide synthesis protein; PFAM: Capsular polysaccharide synthesis protein.
  
  
 0.809
ADV42572.1
Hypothetical protein; KEGG: similar to Galactoside 2-alpha-L-fucosyltransferase 3 (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 3) (Alpha(1,2)FT 3) (Fucosyltransferase 10) (Secretory blood group protein 1); SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 11.
       0.788
ADV42573.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ter:Tery_3238 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase family 1; PFAM: Glycosyl transferase family 2.
 
    
0.746
ADV42569.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tye:THEYE_A2095 lipopolysaccharide biosynthesis glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Beta 1,4 glucosyltransferase; PFAM: Glycosyl transferase family 2.
     0.660
ADV42575.1
COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: bth:BT_3362 heptosyltransferase; PFAM: glycosyl transferase family 9; SPTR: Putative uncharacterized protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase).
  
  
 0.578
ADV42574.1
COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: pru:PRU_2910 lipid A biosynthesis acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: Lipid A biosynthesis acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase.
     
 0.564
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.