STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42597.1Aminoglycoside phosphotransferase; InterPro IPR002575; KEGG: bfs:BF0850 putative desulfatase; PFAM: aminoglycoside phosphotransferase; SPTR: Putative uncharacterized protein; PFAM: Phosphotransferase enzyme family. (360 aa)    
Predicted Functional Partners:
ADV43144.1
KEGG: bth:BT_3808 hypothetical protein; SPTR: Putative uncharacterized protein.
    0.950
ADV42596.1
KEGG: bfs:BF0152 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.896
ADV42153.1
Alpha-N-acetylgalactosaminidase; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: bvu:BVU_2041 putative oxidoreductase; PFAM: oxidoreductase domain protein; PRIAM: Alpha-N-acetylgalactosaminidase; SPTR: Putative uncharacterized protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
 
     0.588
ADV42950.1
Alpha-N-acetylgalactosaminidase; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: cpi:Cpin_6559 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; PRIAM: Alpha-N-acetylgalactosaminidase; SPTR: Putative uncharacterized protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
 
     0.504
ADV42595.1
COGs: COG0174 Glutamine synthetase; InterPro IPR008147: IPR008146; KEGG: bth:BT_0785 glutamine synthetase I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: Glutamate--ammonia ligase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain.
       0.478
ADV42598.1
KEGG: vfm:VFMJ11_B0085 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.467
ADV42795.1
KEGG: bfs:BF4033 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.434
ADV44501.1
GCN5-related N-acetyltransferase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: bth:BT_1079 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.
   
 
 0.402
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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