STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42653.1Sel1 domain protein repeat-containing protein; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: aas:Aasi_0895 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Sel1 repeat; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain. (363 aa)    
Predicted Functional Partners:
ADV42654.1
Sel1 domain protein repeat-containing protein; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: lpp:lpp1310 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Sel1 repeat; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
    
0.806
ADV42656.1
KEGG: ter:Tery_2057 hypothetical protein; SPTR: KWG Leptospira; PFAM: KWG Leptospira.
       0.693
ADV42655.1
KEGG: ptr:742010 Purkinje cell protein 2; SPTR: Purkinje cell protein 2 homolog; manually curated.
       0.681
ADV42657.1
Hypothetical protein; InterPro IPR013152; KEGG: vpo:Kpol_1033p19 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.597
ADV42658.1
Hypothetical protein; KEGG: rhi:NGR_c03650 hemolysin-type calcium-binding repeat-like hypothetical protein; SPTR: Putative uncharacterized protein.
       0.516
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.410
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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