STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42663.1Radical SAM domain protein; COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); InterPro IPR007197; KEGG: sat:SYN_02408 radical SAM superfamily protein; PFAM: Radical SAM domain protein; SPTR: Putative uncharacterized protein; PFAM: Radical SAM superfamily. (401 aa)    
Predicted Functional Partners:
ADV42662.1
KEGG: sat:SYN_02409 putative cytoplasmic protein; SPTR: Putative uncharacterized protein.
      0.924
ADV42661.1
KEGG: sat:SYN_02410 putative cytoplasmic protein; SPTR: Putative uncharacterized protein.
       0.802
ADV42664.1
KEGG: mdo:100010750 hypothetical protein LOC100010750; SPTR: Putative uncharacterized protein.
       0.797
ADV42665.1
COGs: COG5492 Bacterial surface protein containing Ig-like domains; InterPro IPR003343; KEGG: clj:CLJU_c22390 putative surface/cell-adhesion protein; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2).
  
    0.719
ADV42659.1
KEGG: bts:Btus_2928 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.469
ADV42660.1
Hypothetical protein; COGs: COG1106 ATPase; KEGG: hau:Haur_3672 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RecF/RecN/SMC N terminal domain.
       0.469
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.