STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42666.1Hypothetical protein; InterPro IPR019775; KEGG: cat:CA2559_00400 hypothetical protein; SPTR: Putative uncharacterized protein. (211 aa)    
Predicted Functional Partners:
ADV42637.1
KEGG: bth:BT_3309 transcriptional regulator; SPTR: Transcriptional regulator.
  
     0.552
ADV43932.1
Hypothetical protein; InterPro IPR014907; KEGG: bth:BT_1702 hypothetical protein; PFAM: VirE; SPTR: Putative uncharacterized protein; PFAM: VirE N-terminal domain.
  
     0.523
ADV43931.1
KEGG: bth:BT_1638 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.480
ADV42189.1
TonB-dependent receptor; InterPro IPR012910: IPR000531; KEGG: pdi:BDI_3110 hypothetical protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.414
ADV44896.1
Polysaccharide biosynthesis protein; InterPro IPR002797: IPR013838; KEGG: pdi:BDI_3621 putative flippase, involved in lipopolysaccharide biosynthesis; PFAM: polysaccharide biosynthesis protein; SPTR: Putative flippase, involved in lipopolysaccharide biosynthesis; PFAM: Polysaccharide biosynthesis protein.
  
     0.403
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.