STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42668.1Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: bfs:BF0657 putative aminopeptidase; PFAM: peptidase M28; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M28. (334 aa)    
Predicted Functional Partners:
ADV42669.1
Nucleoside recognition domain protein; COGs: COG2715 Uncharacterized membrane protein required for spore maturation in B.subtilis; InterPro IPR011642: IPR011415; KEGG: bfs:BF0125 putative transmembrane spore maturation-like protein; PFAM: nucleoside recognition domain protein; SPTR: Putative uncharacterized protein; PFAM: Nucleoside recognition.
       0.678
ADV43342.1
Dipeptidyl-peptidase IV; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: bfs:BF0899 putative dipeptidyl peptidase; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
  
    0.607
ADV42803.1
Prolyl tripeptidyl peptidase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: bfs:BF0097 putative exported dipeptidyl peptidase IV; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
  
    0.558
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.550
ADV42667.1
COGs: COG4912 DNA alkylation repair protein; InterPro IPR014825; KEGG: bfs:BF0126 hypothetical protein; PFAM: DNA alkylation repair enzyme; SPTR: Putative uncharacterized protein; PFAM: DNA alkylation repair enzyme.
       0.535
ADV44321.1
Sphingomyelin phosphodiesterase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: bfs:BF2358 putative phosphodiesterase-nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; PRIAM: Sphingomyelin phosphodiesterase; SPTR: Putative uncharacterized protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.527
ADV42585.1
KEGG: bfs:BF3240 putative lipoprotein; SPTR: Putative uncharacterized protein.
  
     0.499
ADV43352.1
Hypothetical protein; InterPro IPR018247; KEGG: pdi:BDI_3423 hypothetical protein; SPTR: Putative exported protein.
  
     0.469
ADV42373.1
KEGG: bfr:BF0465 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.463
ADV43355.1
KEGG: bfr:BF4063 hypothetical protein; SPTR: Predicted protein.
  
     0.455
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.