STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42753.1KEGG: bfs:BF0061 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (391 aa)    
Predicted Functional Partners:
ADV42755.1
KEGG: bfs:BF4290 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.836
ADV42259.1
InterPro IPR011659; KEGG: pdi:BDI_0062 hypothetical protein; PFAM: WD40-like beta Propeller containing protein; SPTR: Putative uncharacterized protein; PFAM: WD40-like Beta Propeller Repeat.
 
 
   0.781
ADV43433.1
Hypothetical protein; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: pdi:BDI_3581 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: WD40-like Beta Propeller Repeat.
 
 
   0.774
ADV42585.1
KEGG: bfs:BF3240 putative lipoprotein; SPTR: Putative uncharacterized protein.
  
     0.773
ADV42752.1
KEGG: bfs:BF0409 hypothetical protein; SPTR: Hypothetical exported protein.
       0.773
ADV42632.1
Hypothetical protein; InterPro IPR011659; KEGG: pdi:BDI_3581 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: WD40-like Beta Propeller Repeat.
 
 
   0.766
ADV42754.1
KEGG: phe:Phep_4133 hypothetical protein; SPTR: Predicted protein.
       0.762
ADV43358.1
COGs: COG3307 Lipid A core - O-antigen ligase; InterPro IPR007016; KEGG: bfs:BF2988 hypothetical protein; PFAM: O-antigen polymerase; SPTR: Putative uncharacterized protein; PFAM: O-Antigen ligase.
  
     0.756
ADV43362.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: bfs:BF2984 putative ABC transport system, membrane protein; PFAM: acriflavin resistance protein; SPTR: Putative uncharacterized protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.749
ADV43361.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bfr:BF3150 putative outer membrane protein TolC; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
  
     0.743
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.