STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42781.1KEGG: bfs:BF0074 hypothetical protein; SPTR: Putative uncharacterized protein. (243 aa)    
Predicted Functional Partners:
ADV42780.1
Conserved hypothetical protein CHP00730; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: bth:BT_3224 putative lysine decarboxylase; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2; Belongs to the LOG family.
  
    0.857
ADV42782.1
COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: bfs:BF0075 uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: Putative uncharacterized protein; PFAM: Uroporphyrinogen-III synthase HemD.
       0.853
ADV44314.1
KEGG: bfr:BF2278 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.784
ADV42072.1
KEGG: bfs:BF3669 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
ADV42801.1
KEGG: bfs:BF0095 putative transmembrane protein; SPTR: Putative uncharacterized protein.
  
     0.774
ADV43461.1
KEGG: bfs:BF0922 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
ADV44868.1
KEGG: bfs:BF3008 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
ADV43442.1
KEGG: bfs:BF0849 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3256).
  
     0.765
ADV44810.1
KEGG: bfs:BF1652 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
ADV45032.1
KEGG: bfs:BF3160 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.764
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.