STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42801.1KEGG: bfs:BF0095 putative transmembrane protein; SPTR: Putative uncharacterized protein. (332 aa)    
Predicted Functional Partners:
ADV42800.1
SNARE associated Golgi protein-like protein; COGs: COG1238 membrane protein; InterPro IPR015414: IPR020143; KEGG: bfs:BF0094 putative transmembrane protein; PFAM: SNARE associated Golgi protein; SPTR: Putative uncharacterized protein; PFAM: SNARE associated Golgi protein.
  
    0.880
purD
COGs: COG0151 Phosphoribosylamine-glycine ligase; InterProIPR020562: IPR020561: IPR020560: IPR000115: IPR 011761; KEGG: bth:BT_3253 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Putative uncharacterized protein; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglyc [...]
  
    0.878
ADV42803.1
Prolyl tripeptidyl peptidase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: bfs:BF0097 putative exported dipeptidyl peptidase IV; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
  
    0.827
ADV42804.1
rRNA (guanine-N(2)-)-methyltransferase; COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR004114: IPR000241: IPR002052; KEGG: bth:BT_3255 putative N6-adenine-specific DNA methylase; PFAM: RNA methylase; THUMP domain-containing protein; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: Putative uncharacterized protein; PFAM: Putative RNA methylase family UPF0020; THUMP domain; Belongs to the methyltransferase superfamily.
       0.785
ADV42781.1
KEGG: bfs:BF0074 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
ADV43571.1
KEGG: bfs:BF3407 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
ADV42072.1
KEGG: bfs:BF3669 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
ADV43461.1
KEGG: bfs:BF0922 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
ADV42438.1
KEGG: bth:BT_3578 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3316).
  
     0.769
ADV44868.1
KEGG: bfs:BF3008 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.