STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42840.1COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685: IPR005479; KEGG: bfr:BF4542 putative mechano-sensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: Putative uncharacterized protein; PFAM: Mechanosensitive ion channel. (602 aa)    
Predicted Functional Partners:
ADV42839.1
Na+/Ca+ antiporter, CaCA family; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837: IPR004481; KEGG: bth:BT_3019 putative Na+/Ca2+ exchanger protein, cation antiporter; PFAM: sodium/calcium exchanger membrane region; SPTR: Putative uncharacterized protein; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein.
       0.707
ADV42838.1
KEGG: bfs:BF4332 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.501
ADV43191.1
Multiple antibiotic resistance (MarC)-related protein; COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: bth:BT_2270 MarC family integral membrane protein; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: Putative uncharacterized protein; PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family.
 
    0.500
ADV43291.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bth:BT_4695 outer membrane efflux protein precursor; PFAM: outer membrane efflux protein; SPTR: Outer membrane efflux protein; PFAM: Outer membrane efflux protein.
  
    0.496
ADV44343.1
Protein of unknown function DUF2492; InterPro IPR019620; KEGG: pdi:BDI_1027 hypothetical protein; PFAM: Protein of unknown function DUF2492; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF2492; PFAM: Protein of unknown function (DUF2492); TIGRFAM: probable metal-binding protein.
  
     0.444
ADV43110.1
KEGG: bfr:BF4138 putative periplasmic protein; SPTR: Putative uncharacterized protein.
  
     0.418
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.413
ADV42837.1
COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR001241: IPR003594: IPR013506: IPR006171: IPR 018522; KEGG: bth:BT_3033 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus.
       0.412
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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