STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42889.1CoA-binding domain protein; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterPro IPR003781: IPR011761; KEGG: bth:BT_2924 acetyl-CoA synthetase; PFAM: CoA-binding domain protein; SPTR: Putative uncharacterized protein; PFAM: CoA binding domain. (687 aa)    
Predicted Functional Partners:
ADV45042.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895: IPR017900: IPR002880: IPR019752: IPR 019456: IPR011766: IPR017896; KEGG: bth:BT_1747 pyruvate-flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Pyruvate:ferredoxin (Flavodoxin) oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidored [...]
  
 
 0.699
ADV44481.1
Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: bfs:BF2110 putative amino acid transferase; PFAM: aminotransferase class I and II; SPTR: Putative uncharacterized protein; PFAM: Aminotransferase class I and II.
 
   
 0.664
ADV44466.1
Positive regulator of sigma(E), RseC/MucC; InterPro IPR007359; KEGG: bth:BT_0616 hypothetical protein; PFAM: Positive regulator of sigma(E) RseC/MucC; SPTR: Putative uncharacterized protein; manually curated; PFAM: Positive regulator of sigma(E), RseC/MucC.
  
     0.555
ADV43109.1
KEGG: bth:BT_2685 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.529
ADV42888.1
KEGG: bth:BT_3061 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3575).
  
    0.497
ADV42938.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: bvu:BVU_0986 2-oxoglutarate synthase subunit KorA; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: Putative uncharacterized protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
 
 0.486
ADV44766.1
Thiamine pyrophosphate TPP-binding domain-containing protein; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 
 0.474
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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