STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42925.1HipA domain protein; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894: IPR012893: IPR002057; KEGG: bvu:BVU_3693 hypothetical protein; PFAM: HipA domain protein; SPTR: Toxin-antitoxin system, toxin component, HipA family; PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain. (313 aa)    
Predicted Functional Partners:
ADV42923.1
Transcriptional regulator, y4mF family; InterPro IPR001387: IPR017507; KEGG: bvu:BVU_3695 putative DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Conserved domain protein; TIGRFAM: transcriptional regulator, y4mF family; PFAM: Helix-turn-helix; TIGRFAM: transcriptional regulator, y4mF family.
 
     0.965
ADV42924.1
HipA N-terminal domain protein; InterPro IPR017508; KEGG: bvu:BVU_3694 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: HipA N-terminal domain protein; TIGRFAM: HipA N-terminal domain.
 
     0.965
ADV44269.1
CI repressor; InterPro IPR010744; KEGG: bth:BT_0890 hypothetical protein; PFAM: CI repressor; SPTR: Putative uncharacterized protein; manually curated; PFAM: Bacteriophage CI repressor helix-turn-helix domain.
   
 
 0.669
ADV42922.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: pru:PRU_1496 hypothetical protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, lacI family.
 
 
 0.662
ADV43631.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: bfr:BF1147 putative transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative transcriptional regulator; PFAM: Helix-turn-helix.
 
 
 0.642
ADV43632.1
HipA domain protein; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894: IPR012893; KEGG: bfr:BF1148 hypothetical protein; PFAM: HipA domain protein; SPTR: Toxin-antitoxin system, toxin component, HipA family; PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain.
  
     0.512
ADV44761.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: bfr:BF2945 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
 
 
 0.472
ADV43317.1
InterPro IPR003812; KEGG: gsu:GSU2183 fic family protein; PFAM: filamentation induced by cAMP protein Fic; SPTR: Fic family protein; PFAM: Fic/DOC family.
 
     0.458
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.