STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42959.1C-terminal processing peptidase-3; COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151: IPR004447; KEGG: bth:BT_2798 carboxy-terminal processing protease precursor; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family. (561 aa)    
Predicted Functional Partners:
ADV42958.1
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611: IPR002173; KEGG: bth:BT_2799 PfkB family carbohydrate kinase; PFAM: PfkB domain protein; SPTR: Putative uncharacterized protein; PFAM: pfkB family carbohydrate kinase.
       0.816
ADV42957.1
COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836: IPR016160; KEGG: bth:BT_2800 putative amidophosphoribosyl-transferase; PFAM: phosphoribosyltransferase; SPTR: Putative uncharacterized protein; manually curated; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.
 
     0.653
ADV42102.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: bfs:BF3707 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
 
 
 
 0.577
ADV42956.1
Inositol monophosphatase; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760: IPR020583; KEGG: bfs:BF4187 putative inositol-1-monophosphatase; PFAM: inositol monophosphatase; SPTR: Putative uncharacterized protein; PFAM: Inositol monophosphatase family.
 
     0.531
ADV42487.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: bth:BT_3462 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein.
 
    0.484
ADV43258.1
Lytic transglycosylase catalytic; InterPro IPR000189: IPR008258: IPR018392: IPR002482; KEGG: bfs:BF0693 putative lytic murein transglycosylase; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Putative uncharacterized protein; PFAM: Transglycosylase SLT domain; LysM domain.
 
   
 0.415
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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