STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42979.1Lipid A biosynthesis domain protein; COGs: COG3952 membrane protein; InterPro IPR011499; KEGG: bfs:BF3261 putative transport-related, membrane protein; PFAM: lipid A biosynthesis domain protein; SPTR: Putative uncharacterized protein; PFAM: Lipid A Biosynthesis N-terminal domain. (211 aa)    
Predicted Functional Partners:
ADV42978.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bfs:BF3262 putative glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Dolichol-phosphate mannosyltransferase; PFAM: Glycosyl transferase family 2.
 
     0.963
ADV42980.1
Glycosyl transferase family 39; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: bfr:BF3441 dolichyl-phosphate-mannose-protein mannosyltransferase family protein; PFAM: glycosyl transferase family 39; SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase family protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.952
ADV42981.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: bfs:BF3259 putative UDP-glucuronic acid epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucuronate 5'-epimerase; PFAM: NAD dependent epimerase/dehydratase family.
 
    0.850
ADV42982.1
Calcium-translocating P-type ATPase, PMCA-type; COGs: COG0474 Cation transport ATPase; InterProIPR004014: IPR008250: IPR005834: IPR006068: IPR 006408: IPR001757: IPR000695: IPR018303; KEGG: bfs:BF4149 putative transmembrane calcium-transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Calcium-translocating P-type ATPase, PMCA-type; TIGRFAM: calcium-translocating P-type ATPase, PMCA-type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation tr [...]
       0.458
ADV42983.1
HAD-superfamily hydrolase, subfamily IA, variant 3; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834: IPR006402: IPR005833; KEGG: bfs:BF4148 putative haloacid dehalogenase-type hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Putative uncharacterized protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
       0.458
ADV42984.1
Riboflavin kinase; COGs: COG0196 FAD synthase; InterPro IPR015864: IPR015865: IPR002606; KEGG: bth:BT_2543 riboflavin biosynthesis protein RibF, putative riboflavin kinase; PFAM: Riboflavin kinase; FAD synthetase; SPTR: Putative uncharacterized protein; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.
       0.458
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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