STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV42987.1KEGG: bfs:BF4144 putative transmembrane protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2975). (222 aa)    
Predicted Functional Partners:
ADV42986.1
Abortive infection protein; InterPro IPR003675; KEGG: bth:BT_2544 putative metal-dependent membrane protease; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; PFAM: CAAX amino terminal protease family.
       0.797
ADV42988.1
KEGG: bfs:BF4144 putative transmembrane protein; SPTR: Putative uncharacterized protein.
      
0.671
ADV42989.1
KEGG: bvu:BVU_1295 hypothetical protein; SPTR: Putative uncharacterized protein.
      
0.665
ADV42991.1
COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: bfs:BF4143 putative DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
       0.589
ADV42990.1
Hypothetical protein; KEGG: llk:LLKF_0558 TpsO family regulatory protein; SPTR: Putative uncharacterized protein.
       0.579
ADV42985.1
KEGG: bth:BT_2500 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.451
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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