STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43027.1KEGG: bfs:BF4083 hypothetical protein; SPTR: Putative uncharacterized protein. (224 aa)    
Predicted Functional Partners:
ADV43028.1
ATP:cob(I)alamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR002779: IPR017858; KEGG: bfs:BF4082 putative vitamin B12 related cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: ATP:cob(I)alamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase.
  
    0.794
ADV43029.1
KEGG: bvu:BVU_1469 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2795).
       0.762
ADV44060.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: bth:BT_1472 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
 
   
 0.696
ADV44589.1
KEGG: bfs:BF1947 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.657
ADV43515.1
KEGG: bfs:BF0951 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.640
ADV43158.1
Rod shape-determining protein MreD; InterPro IPR007227; KEGG: bfr:BF4098 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.
  
     0.597
ADV42222.1
InterPro IPR000297; KEGG: bfs:BF3890 putative exported isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Putative uncharacterized protein; PFAM: PPIC-type PPIASE domain.
 
     0.584
ADV44301.1
Sporulation domain-containing protein; InterPro IPR007730; KEGG: bfs:BF2384 hypothetical protein; PFAM: Sporulation domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Sporulation related domain.
  
     0.570
ADV43654.1
WD40-like beta Propeller containing protein; InterPro IPR013026: IPR011659; KEGG: bfs:BF1145 hypothetical protein; PFAM: WD40-like beta Propeller containing protein; SPTR: Putative uncharacterized protein.
 
     0.559
ADV42820.1
Collagenase; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: bth:BT_3072 collagenase precursor; PFAM: peptidase U32; SPTR: Putative uncharacterized protein; PFAM: Peptidase family U32.
  
  
 0.533
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.