STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43276.1Cupin 2 conserved barrel domain protein; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: pdi:BDI_1568 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 domain-containing protein; PFAM: Cupin domain. (149 aa)    
Predicted Functional Partners:
ADV43277.1
Hypothetical protein; InterPro IPR010916; KEGG: bth:BT_1395 hypothetical protein; SPTR: Flavodoxin; TIGRFAM: Listeria/Bacterioides repeat.
 
     0.932
ADV42824.1
Flavodoxin; InterPro IPR008254; KEGG: bfr:BF4307 flavodoxin; SPTR: Probable flavodoxin.
 
     0.732
ADV42906.1
KEGG: bth:BT_1114 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.632
ADV43323.1
KEGG: bth:BT_1114 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.620
ADV42908.1
COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR020471: IPR001395: IPR018170; KEGG: bhy:BHWA1_00281 oxidoreductase, aldo/keto reductase family protein; PFAM: aldo/keto reductase; SPTR: Putative uncharacterized protein; PFAM: Aldo/keto reductase family.
 
     0.570
ADV44952.1
COGs: COG4925 conserved hypothetical protein; KEGG: sli:Slin_2181 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.443
ADV43324.1
COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR017909: IPR006311: IPR001395; KEGG: bth:BT_1115 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family.
 
     0.427
ADV44846.1
COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: bfr:BF2086 putative aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Putative uncharacterized protein; PFAM: Aldo/keto reductase family.
 
     0.412
ADV44930.1
Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524; KEGG: bvu:BVU_1374 transcriptional regulator, FucR; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, gntR family.
  
    0.401
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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