STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43358.1COGs: COG3307 Lipid A core - O-antigen ligase; InterPro IPR007016; KEGG: bfs:BF2988 hypothetical protein; PFAM: O-antigen polymerase; SPTR: Putative uncharacterized protein; PFAM: O-Antigen ligase. (541 aa)    
Predicted Functional Partners:
ADV43357.1
KEGG: bfr:BF0052 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.927
ADV43359.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: bfr:BF3152 putative cation efflux system protein; PFAM: secretion protein HlyD family protein; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.907
ADV43362.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: bfs:BF2984 putative ABC transport system, membrane protein; PFAM: acriflavin resistance protein; SPTR: Putative uncharacterized protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.889
ADV43360.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036: IPR020053; KEGG: bfs:BF2986 putative ABC transport system, membrane protein; PFAM: acriflavin resistance protein; SPTR: Putative uncharacterized protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.877
ADV43352.1
Hypothetical protein; InterPro IPR018247; KEGG: pdi:BDI_3423 hypothetical protein; SPTR: Putative exported protein.
 
     0.862
ADV43354.1
Signal peptidase I; InterPro IPR000223: IPR019759; KEGG: bfs:BF2989 putative signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
 
     0.861
ADV43353.1
Protein of unknown function DUF1573; InterPro IPR011467; KEGG: bfr:BF3160 hypothetical protein; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573).
 
     0.860
ADV43361.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bfr:BF3150 putative outer membrane protein TolC; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
 
    0.857
ADV43355.1
KEGG: bfr:BF4063 hypothetical protein; SPTR: Predicted protein.
 
     0.842
ADV42755.1
KEGG: bfs:BF4290 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.777
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.