STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43504.1KEGG: bth:BT_4325 hypothetical protein; SPTR: Putative uncharacterized protein. (400 aa)    
Predicted Functional Partners:
ADV43505.1
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR017871; KEGG: bth:BT_4326 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
 
     0.965
ADV43855.1
ABC transporter related protein; COGs: COG2884 ATPase involved in cell division; InterPro IPR003593: IPR003439: IPR017871; KEGG: bth:BT_1376 putative ATP-binding protein involved in cell division; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
  
 
 0.803
ADV43506.1
KEGG: bth:BT_4327 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.798
ADV43507.1
Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.798
ADV43508.1
Protein of unknown function DUF151; COGs: COG1259 conserved hypothetical protein; InterPro IPR001943: IPR003729; KEGG: bfr:BF1026 hypothetical protein; PFAM: protein of unknown function DUF151; UvrB/UvrC protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, COG1259; UvrB/uvrC motif.
       0.798
ADV43509.1
KEGG: bvu:BVU_3613 xanthosine permease; SPTR: Putative uncharacterized protein; PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter.
 
   
 0.764
ADV44877.1
KEGG: bfs:BF1592 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.695
ADV42168.1
Phosphate-selective porin O and P; InterPro IPR010870; KEGG: bth:BT_3553 hypothetical protein; PFAM: phosphate-selective porin O and P; SPTR: Putative uncharacterized protein; PFAM: Phosphate-selective porin O and P.
  
     0.677
ADV44568.1
InterPro IPR019062; KEGG: bfr:BF2023 type II restriction enzyme HpaII; PFAM: Restriction endonuclease, type II, HpaII; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Putative uncharacterized protein; PFAM: HpaII restriction endonuclease.
  
     0.648
ADV45032.1
KEGG: bfs:BF3160 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.632
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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