STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43544.1KEGG: bfs:BF0996 hypothetical protein; SPTR: Putative uncharacterized protein. (352 aa)    
Predicted Functional Partners:
ADV43548.1
KEGG: bfr:BF1083 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.901
ADV43539.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: bth:BT_4368 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein.
 
    0.881
ADV43547.1
KEGG: bth:BT_4376 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.879
ADV43546.1
COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR020441: IPR002078: IPR002197: IPR003593; KEGG: bfs:BF0998 putative sigma-54 dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.
     
 0.859
ADV43549.1
Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
     
 0.858
ADV43545.1
4-hydroxythreonine-4-phosphate dehydrogenase; COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: bfs:BF0997 putative 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: Putative uncharacterized protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
  
    0.857
ADV43542.1
KEGG: bfr:BF1077 peptidyl-prolyl cis-trans isomerase; SPTR: Putative uncharacterized protein.
 
  
 0.813
ADV43540.1
Protein of unknown function DUF1239; InterPro IPR010664; KEGG: bth:BT_4369 hypothetical protein; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1239).
 
 
 0.799
ADV45225.1
InterPro IPR003400; KEGG: bfs:BF3527 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; PFAM: Biopolymer transport protein ExbD/TolR.
  
   
 0.778
ADV45226.1
InterPro IPR003400; KEGG: bfs:BF3528 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; PFAM: Biopolymer transport protein ExbD/TolR.
  
   
 0.778
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.