STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43663.1InterPro IPR011123: IPR000792; KEGG: phe:Phep_3632 two component regulator three Y domain protein; PFAM: Two component regulator three Y domain-containing protein; regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Putative uncharacterized protein; PFAM: Y_Y_Y domain. (961 aa)    
Predicted Functional Partners:
ADV43665.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pru:PRU_1951 putative lipoprotein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.767
ADV43664.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: pru:PRU_1950 putative receptor antigen RagA; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative uncharacterized protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.734
ADV42262.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pdi:BDI_0086 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.729
ADV42263.1
TonB-dependent receptor; InterPro IPR012910: IPR000531; KEGG: pdi:BDI_0087 hypothetical protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative uncharacterized protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.723
ADV42524.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bvu:BVU_1368 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: SusD family.
 
     0.581
ADV43477.1
KEGG: pdi:BDI_0466 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1649.
  
     0.553
ADV45180.1
Integral membrane sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358: IPR018062: IPR001345: IPR011110: IPR 011123: IPR003661: IPR003594: IPR001789: IPR000005: IPR018060:I PR005467; KEGG: bth:BT_1734 two-component system sensor histidine kinase/response regulator, hybrid ('one component system'); PFAM: ATP-binding region ATPase domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; histidine kinase A domain protein; response regulator receiver; helix-turn-helix- domain containing pr [...]
  
 
 0.552
ADV43613.1
Integral membrane sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358: IPR018060: IPR005467: IPR001789: IPR 011110: IPR011123: IPR003661: IPR003594: IPR000005; KEGG: bth:BT_4663 two-component system sensor histidine kinase/response; PFAM: ATP-binding region ATPase domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; histidine kinase A domain protein; response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: ATP-binding region ATPase domain protein; [...]
 
 
 
 0.544
ADV42126.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: phe:Phep_3171 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.543
ADV42155.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bfr:BF0947 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative lipoprotein; PFAM: SusD family.
 
     0.540
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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