STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43680.1Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR015171: IPR006047: IPR019492: IPR006589; KEGG: bfs:BF3134 putative alpha-amylase precursor; PFAM: alpha amylase catalytic region; Cyclomaltodextrinase; Cyclo-malto-dextrinase-like; SMART: alpha amylase catalytic sub domain; SPTR: Putative uncharacterized protein; PFAM: Cyclomaltodextrinase, N-terminal; Alpha amylase, catalytic domain; Cyclo-malto-dextrinase C-terminal domain; Belongs to the glycosyl hydrolase 13 family. (616 aa)    
Predicted Functional Partners:
ADV44974.1
COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterProIPR006589: IPR011840: IPR004193: IPR006047: IPR 006048: IPR002355; KEGG: bfs:BF3100 putative exported amylase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: Pullulanase, type I; TIGRFAM: pullulanase, type I; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
  
0.944
ADV43672.1
Glycoside hydrolase 97; InterPro IPR019563; KEGG: bth:BT_4581 alpha-glucosidase; PFAM: Glycoside hydrolase 97; SPTR: Putative uncharacterized protein; PFAM: Glycoside hydrolase 97.
 
  
 0.859
ADV44998.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pru:PRU_2682 outer membrane protein SusD; PFAM: RagB/SusD domain protein; SPTR: Outer membrane protein; PFAM: SusD family.
 
  
 0.808
ADV44999.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: pru:PRU_2681 outer membrane protein SusC; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein SusC; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
   
 0.759
ADV45002.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843: IPR001761; KEGG: bfs:BF3147 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: Putative uncharacterized protein; manually curated; PFAM: Bacterial regulatory proteins, lacI family; family.
 
  
 0.719
ADV45003.1
Major facilitator superfamily MFS_1; COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: bvu:BVU_1386 sugar transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein; PFAM: Major Facilitator Superfamily.
 
  
 0.692
ADV43681.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: bth:BT_1690 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR-domain-containing protein; PFAM: Tetratricopeptide repeat.
       0.683
ADV44995.1
Alpha amylase catalytic region; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR006047; KEGG: bfr:BF3304 putative alpha-amylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Lipoprotein; PFAM: Alpha amylase, catalytic domain.
 
  
0.592
ADV43682.1
Sodium ion-translocating decarboxylase, beta subunit; COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: bvu:BVU_2488 oxaloacetate decarboxylase beta chain; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; PRIAM: Glutaconyl-CoA decarboxylase; SPTR: Oxaloacetate decarboxylase subunit beta; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit.
       0.583
ADV43684.1
KEGG: bvu:BVU_2490 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Oxaloacetate decarboxylase, gamma chain.
       0.544
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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