STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43771.1Hypothetical protein; KEGG: pgn:PGN_1291 conserved hypothetical protein related to phage; SPTR: Putative uncharacterized protein. (50 aa)    
Predicted Functional Partners:
ADV43772.1
KEGG: bfr:BF0106 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.788
ADV43416.1
Protein of unknown function DUF477; COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: bfs:BF0836 hypothetical protein; PFAM: protein of unknown function DUF477; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF477).
  
  
 0.740
ADV43773.1
KEGG: bth:BT_2283 hypothetical protein; SPTR: Ctn001.
       0.729
ADV43774.1
COGs: COG4474 conserved hypothetical protein; KEGG: bth:BT_2282 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1273).
       0.714
ADV43775.1
KEGG: pgn:PGN_1295 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.704
ADV43770.1
KEGG: pdi:BDI_1003 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA-binding protein, histone-like, putative.
       0.435
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.