STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43878.1KEGG: bfs:BF2824 hypothetical protein; SPTR: Putative uncharacterized protein. (154 aa)    
Predicted Functional Partners:
ADV43877.1
Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.648
ADV43876.1
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate.
       0.644
ADV45021.1
KEGG: bfs:BF1295 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.634
ADV42362.1
KEGG: bth:BT_3714 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.537
ADV43270.1
Protein of unknown function DUF349; InterPro IPR007139; KEGG: bfs:BF0704 hypothetical protein; PFAM: protein of unknown function DUF349; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF349).
  
     0.516
ADV42345.1
KEGG: bfs:BF0456 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
     0.464
ADV43512.1
KEGG: bfs:BF0949 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.461
ADV43879.1
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119: IPR006118; KEGG: bfs:BF2779 multiple promoter invertase; PFAM: Resolvase domain; SPTR: Putative uncharacterized protein; PFAM: Resolvase, N terminal domain.
       0.457
ADV42219.1
KEGG: bth:BT_3849 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.452
ADV43552.1
KEGG: bth:BT_4382 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.447
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.