Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADV43903.1NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR003646: IPR000064; KEGG: bfr:BF2747 dipeptidyl peptidase VI; PFAM: NLP/P60 protein; SMART: SH3 domain protein; SPTR: Putative uncharacterized protein; PFAM: NlpC/P60 family. (401 aa)    
Predicted Functional Partners:
ADV43904.1
Mandelate racemase/muconate lactonizing protein; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341: IPR013342: IPR006311: IPR017909; KEGG: bfr:BF2746 muconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: Putative uncharacterized protein; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
  
 0.886
ADV43905.1
COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: bfr:BF2745 putative cysteine protease; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Transglutaminase-like superfamily.
 
    0.840
ADV42102.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: bfs:BF3707 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
   
 
 0.619
ADV42769.1
COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: bfs:BF0066 putative cell division protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
  
 
 0.468
ADV43504.1
KEGG: bth:BT_4325 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.468
ADV42413.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: phe:Phep_4138 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
   
 0.462
ADV43855.1
ABC transporter related protein; COGs: COG2884 ATPase involved in cell division; InterPro IPR003593: IPR003439: IPR017871; KEGG: bth:BT_1376 putative ATP-binding protein involved in cell division; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
  
 
 0.457
ADV43533.1
KEGG: bfr:BF1067 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.442
ADV43906.1
Protease Do; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001940: IPR001254: IPR011782; KEGG: bfs:BF2761 putative heat shock-related protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: protease Do; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family.
  
  
 0.412
ADV44382.1
Hypothetical protein; InterPro IPR006089; KEGG: pmr:PMI0527 phage host specificity protein; SPTR: Predicted protein.
  
    0.404
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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