STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43950.1KEGG: pin:Ping_1180 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Acyltransferase family. (290 aa)    
Predicted Functional Partners:
ADV43953.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ecx:EcHS_A2166 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
 
  
 0.694
ADV43952.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bvu:BVU_4020 glycosyl transferase family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase family 4; PFAM: Glycosyl transferases group 1.
  
  
 0.648
ADV43951.1
KEGG: bvu:BVU_4021 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.636
ADV43298.1
Erythromycin esterase; InterPro IPR007815; KEGG: bfr:BF0006 hypothetical protein; PFAM: Erythromycin esterase; SPTR: Putative uncharacterized protein; PFAM: Erythromycin esterase.
  
     0.581
ADV43948.1
Acyltransferase 3; InterPro IPR002656; KEGG: pru:PRU_2543 acyltransferase family protein; PFAM: acyltransferase 3; SPTR: Acyltransferase family protein; PFAM: Acyltransferase family.
     
 0.478
ADV44403.1
COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: bfs:BF2282 putative two component system response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain.
  
     0.470
ADV42757.1
KEGG: bfs:BF1337 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.459
ADV43944.1
CDP-glucose 4,6-dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR013445; KEGG: bth:BT_1350 CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase.
  
  
 0.421
ADV43943.1
Glucose-1-phosphate cytidylyltransferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835: IPR013446; KEGG: pru:PRU_0434 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate cytidylyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase.
  
  
 0.418
ADV44356.1
COGs: COG0358 DNA primase; InterPro IPR002694; KEGG: bfs:BF2325 putative DNA primase; SPTR: Putative uncharacterized protein; PFAM: CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core.
  
     0.402
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.