STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43951.1KEGG: bvu:BVU_4021 hypothetical protein; SPTR: Putative uncharacterized protein. (378 aa)    
Predicted Functional Partners:
ADV43952.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bvu:BVU_4020 glycosyl transferase family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase family 4; PFAM: Glycosyl transferases group 1.
       0.774
ADV43953.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ecx:EcHS_A2166 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
       0.773
ADV43950.1
KEGG: pin:Ping_1180 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Acyltransferase family.
       0.636
ADV43954.1
Hypothetical protein; InterPro IPR000276; KEGG: bvu:BVU_4024 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: IS66 Orf2 like protein.
       0.413
ADV43948.1
Acyltransferase 3; InterPro IPR002656; KEGG: pru:PRU_2543 acyltransferase family protein; PFAM: acyltransferase 3; SPTR: Acyltransferase family protein; PFAM: Acyltransferase family.
       0.404
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.