STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43972.1Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; COGs: COG1109 Phosphomannomutase; InterPro IPR005841: IPR005844: IPR005845: IPR016066; KEGG: bvu:BVU_3804 putative phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; SPTR: Putative uncharacterized protein; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomuta [...] (581 aa)    
Predicted Functional Partners:
pgi
COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672: IPR018189; KEGG: bfs:BF3604 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); PRIAM: Glucose-6-phosphate isomerase; SPTR: Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
 
 
 0.957
ADV43943.1
Glucose-1-phosphate cytidylyltransferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835: IPR013446; KEGG: pru:PRU_0434 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate cytidylyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase.
  
 
 0.928
ADV44405.1
Ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000836: IPR000842: IPR005946; KEGG: bth:BT_0748 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase.
  
 0.927
ADV43991.1
COGs: COG0058 Glucan phosphorylase; InterPro IPR000811: IPR011834; KEGG: bth:BT_1293 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: Putative uncharacterized protein; TIGRFAM: alpha-glucan phosphorylase; PFAM: Starch synthase catalytic domain; Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases.
  
 
 0.923
ADV45192.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.923
ADV44802.1
Transketolase; COGs: COG0021 Transketolase; InterPro IPR005474: IPR005475: IPR020826; KEGG: bth:BT_0347 transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; PRIAM: Formaldehyde transketolase; SPTR: Putative uncharacterized protein; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain; Belongs to the transketolase family.
  
 0.921
ADV44974.1
COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterProIPR006589: IPR011840: IPR004193: IPR006047: IPR 006048: IPR002355; KEGG: bfs:BF3100 putative exported amylase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: Pullulanase, type I; TIGRFAM: pullulanase, type I; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
    
 0.916
ADV42034.1
COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR002044: IPR003385; KEGG: bfs:BF3620 putative alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; glycoside hydrolase starch-binding; PRIAM: 4-alpha-glucanotransferase; SPTR: Putative uncharacterized protein; PFAM: Starch binding domain; 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase.
  
 
 0.915
ADV42095.1
ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: bfr:BF1751 transcriptional regulator; PFAM: ROK family protein; SPTR: ROK family transcriptional repressor; PFAM: ROK family.
  
 
 0.912
ADV42284.1
ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: bth:BT_2493 ROK family transcriptional repressor; PFAM: ROK family protein; SPTR: Putative uncharacterized protein; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase).
  
 
 0.912
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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