STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43976.1KEGG: bfs:BF2937 hypothetical protein; SPTR: Putative exported protein; PFAM: BNR/Asp-box repeat. (544 aa)    
Predicted Functional Partners:
ADV42795.1
KEGG: bfs:BF4033 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.608
ADV44431.1
KEGG: bvu:BVU_2198 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.569
ADV42433.1
COGs: COG1874 Beta-galactosidase; InterPro IPR019801: IPR001944; KEGG: bfs:BF3793 putative exported beta-galactosidase; PFAM: glycoside hydrolase family 35; PRIAM: Beta-galactosidase; SPTR: Beta-galactosidase; PFAM: Glycosyl hydrolases family 35.
  
 0.556
ADV44727.1
Sialidase; COGs: COG4409 Neuraminidase (sialidase); KEGG: bvu:BVU_4143 sialidase; SPTR: Sialidase; PFAM: BNR/Asp-box repeat.
  
     0.525
ADV43977.1
KEGG: bfs:BF0631 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Pregnancy-associated plasma protein-A.
       0.517
ADV45040.1
Hypothetical protein; InterPro IPR005829; KEGG: bth:BT_1745 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.509
ADV43242.1
KEGG: bfs:BF0540 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.505
ADV44728.1
KEGG: bfr:BF1715 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.502
ADV44724.1
KEGG: bfr:BF2190 putative acetylhydrolase; SPTR: Putative uncharacterized protein.
  
     0.446
ADV45146.1
Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.
 
   
 0.419
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.