STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43981.1Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; COGs: COG1705 Muramidase (flagellum-specific); InterProIPR013338: IPR002482: IPR000423: IPR002901: IPR 018392; KEGG: bth:BT_1538 hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Peptidoglycan-binding lysin domain; SMART: Lysozyme subfamily 2; Peptidoglycan-binding LysM; SPTR: Putative uncharacterized protein; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; LysM domain. (308 aa)    
Predicted Functional Partners:
ADV43980.1
COGs: COG0295 Cytidine deaminase; InterPro IPR002125: IPR016192; KEGG: bfr:BF1494 cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Putative uncharacterized protein; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric.
       0.720
ADV42770.1
KEGG: bth:BT_3211 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3098).
  
     0.683
ADV42729.1
KEGG: bfs:BF0012 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.511
ADV45139.1
KEGG: bfs:BF3496 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.507
ADV42330.1
Hypothetical protein; InterPro IPR017441; KEGG: bvu:BVU_0479 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Lipid A 3-O-deacylase (PagL).
  
  
 0.504
ADV43425.1
InterPro IPR018550; KEGG: bth:BT_3434 hypothetical protein; PFAM: Lipid A 3-O-deacylase-related; SPTR: Putative uncharacterized protein; PFAM: Lipid A 3-O-deacylase (PagL).
  
  
 0.504
ADV43889.1
Hypothetical protein; InterPro IPR010106; KEGG: bth:BT_2030 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
  
 0.504
ADV44047.1
Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: bth:BT_1536 ABC transporter permease; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit.
       0.430
ADV42083.1
COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070: IPR004388; KEGG: bfs:BF3675 hypothetical protein; PFAM: SUA5/yciO/yrdC domain; SPTR: Putative uncharacterized protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; manually curated; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein.
 
     0.425
ADV42239.1
Septum formation initiator; InterPro IPR007060; KEGG: bfs:BF3072 putative septum formation initiator-related protein; PFAM: Septum formation initiator; SPTR: Putative uncharacterized protein; PFAM: Septum formation initiator.
  
   
 0.423
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.