STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43990.1Glycogen(starch) synthase; InterPro IPR001296; KEGG: bth:BT_1294 glycogen [starch] synthase, glycosyltransferase; PFAM: glycosyl transferase group 1; PRIAM: Glycogen(starch) synthase; SPTR: Putative uncharacterized protein; PFAM: Glycogen synthase. (553 aa)    
Predicted Functional Partners:
ADV43991.1
COGs: COG0058 Glucan phosphorylase; InterPro IPR000811: IPR011834; KEGG: bth:BT_1293 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: Putative uncharacterized protein; TIGRFAM: alpha-glucan phosphorylase; PFAM: Starch synthase catalytic domain; Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases.
 
 0.989
ADV44341.1
Alpha amylase all-beta; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR004193: IPR006047: IPR006048: IPR006589; KEGG: bfr:BF2243 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Putative uncharacterized protein; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain.
  
 0.757
ADV43458.1
Amylo-alpha-16-glucosidase; COGs: COG3408 Glycogen debranching protein; InterPro IPR010401; KEGG: bfs:BF0919 hypothetical protein; PFAM: Amylo-alpha-16-glucosidase; SPTR: Putative uncharacterized protein; PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, putative.
 
 
 0.708
ADV43460.1
ATP synthase F1 subcomplex epsilon subunit; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: bfs:BF0921 putative glycosyl hydrolase; PFAM: glycoside hydrolase family 57; PRIAM: Alpha-amylase; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolase family 57.
 
  
 0.702
ADV43459.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bvu:BVU_2775 glycosyl transferase family protein; PFAM: glycosyl transferase group 1; SPTR: Putative uncharacterized protein; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1.
  
   
 0.667
ADV43988.1
V-type ATPase 116 kDa subunit; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: bfs:BF2744 putative V(vacuolar)-type Na+ ATP synthase subunit I; PFAM: V-type ATPase 116 kDa subunit; SPTR: Putative uncharacterized protein; PFAM: V-type ATPase 116kDa subunit family; Belongs to the V-ATPase 116 kDa subunit family.
     
 0.631
ADV43987.1
COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699; KEGG: bfs:BF2745 V-type ATP synthase subunit D; PFAM: H+transporting two-sector ATPase D subunit; SPTR: Putative uncharacterized protein; PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D.
       0.620
ADV43986.1
H+transporting two-sector ATPase alpha/beta subunit central region; COGs: COG1156 H+-ATPase subunit B; InterPro IPR004100: IPR000194; KEGG: bth:BT_1298 V-type ATP synthase subunit B; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SPTR: Putative uncharacterized protein; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain.
  
    0.616
atpA
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.610
ADV43984.1
KEGG: bfs:BF2748 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2764).
     
 0.607
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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