STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV43992.1Domain of unknown function DUF2023; InterPro IPR018594; KEGG: bvu:BVU_3218 hypothetical protein; PFAM: Domain of unknown function DUF2023; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2023). (126 aa)    
Predicted Functional Partners:
ADV43993.1
Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
 
    0.934
ADV44308.1
Surface antigen (D15); InterPro IPR000184; KEGG: bth:BT_1814 hypothetical protein; PFAM: surface antigen (D15); SPTR: Putative uncharacterized protein; PFAM: Surface antigen.
  
     0.501
ADV43790.1
KEGG: bfr:BF3849 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3575).
  
     0.469
ADV43624.1
KEGG: bth:BT_4652 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Heparinase II/III-like protein.
  
     0.456
ADV43994.1
KEGG: bth:BT_2481 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.439
ADV42454.1
KEGG: bfr:BF3849 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3575).
  
     0.431
ADV43649.1
DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: bfs:BF1137 putative transposase; SPTR: Putative uncharacterized protein; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.
  
     0.408
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.