STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44005.1Putative methionine transporter, NhaC family; COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: bfr:BF2713 putative Na+/H+ antiporter; PFAM: Na+/H+ antiporter NhaC-like; SPTR: Putative uncharacterized protein; PFAM: Na+/H+ antiporter family; TC 2.A.35.1.-. (474 aa)    
Predicted Functional Partners:
ADV44006.1
Transcriptional regulator, LacI family; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR000843; KEGG: bfr:BF2701 transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, lacI family.
 
     0.784
rpsP
COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: bth:BT_1271 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
    0.549
ADV44007.1
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: bvu:BVU_3055 2-dehydro-3-deoxygluconokinase; PFAM: PfkB domain protein; SPTR: Putative uncharacterized protein; PFAM: pfkB family carbohydrate kinase.
     
 0.504
ADV45034.1
COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: bth:BT_1742 carbon starvation protein A; PFAM: carbon starvation protein CstA; SPTR: Putative uncharacterized protein; PFAM: Carbon starvation protein CstA.
  
    0.491
ADV42420.1
COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: bfr:BF0437 sodium/iodide co-transporter; PFAM: Na+/solute symporter; SPTR: Putative uncharacterized protein; PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.482
ADV44008.1
COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: bvu:BVU_3056 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; SPTR: Putative uncharacterized protein; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase.
       0.469
ADV44402.1
AbgT transporter; COGs: COG2978 Putative p-aminobenzoyl-glutamate transporter; InterPro IPR004697; KEGG: bfs:BF2283 putative transport-related membrane protein; PFAM: AbgT transporter; SPTR: Putative uncharacterized protein; PFAM: AbgT putative transporter family; TIGRFAM: p-Aminobenzoyl-glutamate transporter family.
 
   
 0.418
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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