STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44047.1Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: bth:BT_1536 ABC transporter permease; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit. (415 aa)    
Predicted Functional Partners:
ADV44055.1
Protein of unknown function DUF214; InterPro IPR003838; KEGG: bvu:BVU_2350 ABC transporter permease; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
 0.900
ADV44048.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: bfr:BF1500 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
 0.896
ADV44052.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: pdi:BDI_1955 ABC transporter permease; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
 0.891
ADV44049.1
Protein of unknown function DUF214; InterPro IPR003838; KEGG: bfs:BF1434 putative ABC transporter permease component; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
 0.885
ADV44051.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: pdi:BDI_1956 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
 0.850
ADV44054.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: bvu:BVU_2349 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
 0.834
ADV44918.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bth:BT_1530 putative outer membrane protein OprM precursor; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
 
 
 0.821
ADV44822.1
Protein of unknown function DUF214; InterPro IPR003838; KEGG: bfr:BF1501 ABC transporter permease; PFAM: protein of unknown function DUF214; SPTR: ABC transporter permease; PFAM: Predicted permease.
 
 
 0.820
ADV43016.1
Protein of unknown function DUF214; InterPro IPR003838; KEGG: bth:BT_1465 putative ABC transporter permease; PFAM: protein of unknown function DUF214; SPTR: Efflux ABC transporter, permease protein; PFAM: Predicted permease.
 
 
 0.800
ADV44916.1
COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterProIPR000014: IPR003594: IPR003660: IPR013767: IPR 005467: IPR004358; KEGG: bth:BT_1528 two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: Putative uncharacterized protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
 
   
 0.794
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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